MRIQC: individual T1w report

Summary

  • BIDS filename: sub-6028_ses-1_T1w.
  • Date and time: 2022-11-14, 21:33.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.4249164362004045
cnr2.9759562534305015
efc0.5541442255628631
fber1299.8763118891204
fwhmavg4.250336666666667
fwhmx4.10607
fwhmy4.84572
fwhmz3.79922
icvscsf0.19989516756891595
icvsgm0.4236454142847538
icvswm0.37645941814633027
inumed1.8381240367889404
inurange0.7266033411026
qi10.00022380330116610284
qi20.003002830647249854
rpvecsf29.596632601948865
rpvegm14.81299266352333
rpvewm19.49794002075289
sizex176
sizey256
sizez256
snrcsf3.063052455858682
snrgm11.516944329464026
snrtotal12.31584597171281
snrwm22.36754112981572
snrdcsf37.44566593138175
snrdgm79.88720649278679
snrdtotal74.10807298910045
snrdwm104.99134654313282
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk558.4568275322724
summarybgmad6.239908353450633
summarybgmean16.06780547836538
summarybgmedian13.913646325469017
summarybgn2738202.0
summarybgp055.892255917191505
summarybgp9531.09526652097702
summarybgstdv9.596280506613722
summarycsfk21.033131288118042
summarycsfmad109.89579770724232
summarycsfmean382.08216981071666
summarycsfmedian356.65478463470936
summarycsfn22562.0
summarycsfp05237.72281740531326
summarycsfp95585.5119850486517
summarycsfstdv116.43512013079551
summarygmk0.2744025245796844
summarygmmad62.91295834008462
summarygmmean763.9866319042195
summarygmmedian760.8932494074106
summarygmn19215.0
summarygmp05660.9724725931883
summarygmp95880.2386648461222
summarygmstdv66.06556634498965
summarywmk1.1668097024112392
summarywmmad38.68743179139393
summarywmmean997.479852925261
summarywmmedian1000.0000042319298
summarywmn196963.0
summarywmp05917.9045394361019
summarywmp951065.161422610283
summarywmstdv44.70752774643882
tpmoverlapcsf0.16276805102825165
tpmoverlapgm0.44588524103164673
tpmoverlapwm0.49941757321357727
wm2max0.5936770135129418
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime14:36:43.872500
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.0344504, 0.975195, 0.21865, 0.00120581, 0.218739, -0.975783]
ImageOrientationTextSag>Cor(1.9)>Tra(0.4)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.262
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0321008
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber14
ShimSetting[2612, 5304, -7421, 200, 25, -822, 48, -296]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp257.843
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum09b58d5b400a46a6da9d109625fbf92e
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.